Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10020012

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10020012
Fusion NameHBV-chr3:q25.3 integration
ValidatedYes
Curated WayVISDB1.0
MethodAlu PCR
Wet AssayYes
Sample IDUnknown
Sample NameUnknown
Sample TypeUnknown
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID12813464
JournalOncogene
Published Year2003
Human Genome
Human Genome Version DescriptionNT-005927
Human Genome RefSeq AccessionNT_005927.15
Human Chromosomechr3
Cytogenetic Bandq25.3
Human Strand
Human Integration Location Type-
Hg19 Start1395083
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length0
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-