| Basic Information ▶ | |
| VISDB ID | TVIS10020020 |
|---|---|
| Fusion Name | HBV-CHAMP1 integration |
| Validated | No |
| Curated Way | VISDB1.0 |
| Method | ABI310 automatic sequencer |
| Wet Assay | No |
| Sample ID | H5 |
| Sample Name | H5 |
| Sample Type | Tumor |
| Age | 47 |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 14712219 |
| Journal | Oncogene |
| Published Year | 2004 |
| Human Genome ▶ | |
| Human Genome Version Description | Unknown |
| Human Genome RefSeq Accession | |
| Human Chromosome | chr13 |
| Cytogenetic Band | q34 |
| Human Strand | |
| Human Integration Location Type | Intronic |
| Hg19 Start | - |
| Hg19 End | - |
| Hg38 Start | - |
| Hg38 End | - |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | - |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | - |
| Virus Genome Accession | D50519.1 |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | Hepatitis B virus clone HBV-ASA-EX3 genomic DNA, complete sequence |
| Virus Genome Length | 3215 |
| Virus Breakpoint1 | 2112 |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | GATCTCCTCGACACCGCCTCTGCTCTGTATCGGGAGGCCTTAGAGT CTCCGGAACATTGTTCACCTCACCATACAGCACTCAGGCAAGCTATTCTCTGT| |TGGGGTGAGTTGATGAA TCTGGCCACCTGGGTGGGAAGTAATTTGGAAGACCCAGCATCCAGGGAATTAGTAGTCAGCTATGTCAAT GTTAATATGGG |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D