Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10020023

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10020023
Fusion Name
ValidatedNo
Curated WayVISDB1.0
MethodABI310 automatic sequencer
Wet AssayNo
Sample IDH16
Sample NameH16
Sample TypeTumor
Age45
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID14712219
JournalOncogene
Published Year2004
Human Genome
Human Genome Version DescriptionUnknown
Human Genome RefSeq Accession
Human Chromosomechr3
Cytogenetic Band
Human Strand
Human Integration Location Type-
Hg19 Start-
Hg19 End-
Hg38 Start-
Hg38 End-
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionD50519.1
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus clone HBV-ASA-EX3 genomic DNA, complete sequence
Virus Genome Length3215
Virus Breakpoint1188
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus SequenceCCCTGTTCCGACTACTGCCTCACCCATATCGTCAATCTTCTCGAGGACTGGGG ACCCTGCACCGAACATGGAGAGCACAACATCAGGATTCCTAGGACC| |CCTGCTCGTATTACAGGCGGGGTT TTTCTTGTTGACAAGAATCCTCACAATACCACAGAGTCTAGACTCGTGGTGGACTTCTCTCAATTTTCTA GGGG
ViMIC ID-