Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10020715

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10020715
Fusion NameHBV-ALB integration
ValidatedNo
Curated WayViMIC
MethodRNA sequencing
Wet AssayYes
Sample ID-
Sample NamePatient 1
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32592629
JournalJournal of Viral Hepatitis
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr4
Cytogenetic Bandq13.3
Human Strand
Human Integration Location Typeexonic
Hg19 Start74280850
Hg19 End74280850
Hg38 Start73415133
Hg38 End73415134
Junction Sequence-
Target Gene
Target GeneALB
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1393
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1400001