Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10020967

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10020967
Fusion NameHBV-chr7:140222030 integration
ValidatedYes
Curated WayViMIC
MethodAlu-PCR
Wet AssayYes
Sample ID-
Sample Name-
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID31231470
JournalOncotarget
Published Year2019
Human Genome
Human Genome Version Description
Human Genome RefSeq Accession
Human Chromosomechr7
Cytogenetic Bandq34
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start140222030
Hg38 End140222128
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneENSG00000293850
Distance7953
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1400253