| Basic Information ▶ | |
| VISDB ID | TVIS10021034 |
|---|---|
| Fusion Name | HBV-SOCS5 integration |
| Validated | No |
| Curated Way | ViMIC |
| Method | HBV capture sequencing |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | FFPE-2629 |
| Sample Type | Tumor |
| Age | 67 |
| Gender | Male |
| Disease Information ▶ | |
| Disease Name | Non-Hodgkin lymphoma |
| Disease Abbreviation | NHL |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 32350851 |
| Journal | International journal of cancer |
| Published Year | 2020 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr2 |
| Cytogenetic Band | p21 |
| Human Strand | + |
| Human Integration Location Type | intronic |
| Hg19 Start | 46993490 |
| Hg19 End | 46993491 |
| Hg38 Start | 46766351 |
| Hg38 End | 46766352 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | SOCS5, LINC01118 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | - |
| Virus Genome Accession | Not given |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | - |
| Virus Genome Length | - |
| Virus Breakpoint1 | 427 |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 1400321 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D