Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10021065

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10021065
Fusion NameHBV-chr1:64705364 integration
ValidatedNo
Curated WayViMIC
MethodHBV capture sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-2629
Sample TypeTumor
Age67
GenderMale
Disease Information
Disease NameNon-Hodgkin lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID32350851
JournalInternational journal of cancer
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandp31.3
Human Strand+
Human Integration Location Typeintergenic
Hg19 Start65171047
Hg19 End65171048
Hg38 Start64705364
Hg38 End64705365
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name+
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12811
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1400352