Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10021216

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10021216
Fusion NameHBV-ENSG00000299894 integration
ValidatedNo
Curated WayViMIC
MethodHBV capture sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon-Hodgkin lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID32350851
JournalInternational journal of cancer
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr12
Cytogenetic Bandq24.31
Human Strand-
Human Integration Location Typeintronic
Hg19 Start125095596
Hg19 End125095597
Hg38 Start124611050
Hg38 End124611051
Junction Sequence-
Target Gene
Target GeneENSG00000299894
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1400506