Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10021218

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10021218
Fusion NameHBV-chr6:137544437 integration
ValidatedNo
Curated WayViMIC
MethodHBV capture sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon-Hodgkin lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID32350851
JournalInternational journal of cancer
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr6
Cytogenetic Bandq23.3
Human Strand-
Human Integration Location Typeintergenic
Hg19 Start137865574
Hg19 End137865575
Hg38 Start137544437
Hg38 End137544438
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneBTF3L4P3
Distance66
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1400508