Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10021231

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10021231
Fusion NameHBV-ENSG00000289131 integration
ValidatedNo
Curated WayViMIC
MethodHBV capture sequencing
Wet AssayYes
Sample ID-
Sample NameC-025
Sample TypeTumor
Age54
GenderMale
Disease Information
Disease NameNon-Hodgkin lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID32350851
JournalInternational journal of cancer
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr18
Cytogenetic Bandq22.3
Human Strand-
Human Integration Location Typeintronic
Hg19 Start71329617
Hg19 End71329618
Hg38 Start73662382
Hg38 End73662383
Junction Sequence-
Target Gene
Target GeneENSG00000289131
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name+
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1346
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1400521