Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10021233

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10021233
Fusion NameHBV-ENSG00000300599 integration
ValidatedNo
Curated WayViMIC
MethodHBV capture sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1822 3
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon-Hodgkin lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID32350851
JournalInternational journal of cancer
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr20
Cytogenetic Bandq12
Human Strand+
Human Integration Location Typeintronic
Hg19 Start37737567
Hg19 End37737568
Hg38 Start39108924
Hg38 End39108925
Junction Sequence-
Target Gene
Target GeneENSG00000300599
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11660
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1400525