Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10021273

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10021273
Fusion NameHBV-ENSG00000294382 integration
ValidatedNo
Curated WayViMIC
MethodHBV capture sequencing
Wet AssayYes
Sample ID-
Sample NameC-025
Sample TypeTumor
Age54
GenderMale
Disease Information
Disease NameNon-Hodgkin lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID32350851
JournalInternational journal of cancer
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandq11.2
Human Strand+
Human Integration Location Typeexonic
Hg19 Start102605204
Hg19 End102605205
Hg38 Start101988742
Hg38 End101988743
Junction Sequence-
Target Gene
Target GeneENSG00000294382, LINC01127
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionNot given
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint13089
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1400565