Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024796

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024796
Fusion NameHBV-chr10:41851864 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI001
Sample TypeAdjacent Liver and tumor
Age51
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr10
Cytogenetic Bandq11.21
Human Strand
Human Integration Location Typeintergenic
Hg19 Start42388343
Hg19 End42388344
Hg38 Start41851864
Hg38 End41851865
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameNA
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1NA
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404112