Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024813

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024813
Fusion NameHBV-ENSG00000263765 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI002
Sample TypeTumor
Age64
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr18
Cytogenetic Bandq12.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start30418333
Hg19 End30418427
Hg38 Start32838370
Hg38 End32838464
Junction Sequence-
Target Gene
Target GeneENSG00000263765
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12256
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404130