Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024827

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024827
Fusion NameHBV-DHTKD1 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI003
Sample TypeAdjacent Liver
Age67
GenderMale
Disease Information
Disease NameBile duct carcinoma
Disease AbbreviationBDC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr10
Cytogenetic Bandp14
Human Strand
Human Integration Location Typeintronic
Hg19 Start12113869
Hg19 End12113870
Hg38 Start12071870
Hg38 End12071871
Junction Sequence-
Target Gene
Target GeneDHTKD1
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11785
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404144