Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024835

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024835
Fusion NameHBV-chr11:54547229 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI003
Sample TypeTumor
Age67
GenderMale
Disease Information
Disease NameBile duct carcinoma
Disease AbbreviationBDC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr11
Cytogenetic Bandq11
Human Strand
Human Integration Location Typeintergenic
Hg19 Start51572049
Hg19 End51572050
Hg38 Start54547229
Hg38 End54547230
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameNA
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1NA
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404152