Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024846

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024846
Fusion NameHBV-chr4:117122867 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI004
Sample TypeAdjacent Liver and tumor
Age47
GenderMale
Disease Information
Disease NameBile duct carcinoma
Disease AbbreviationBDC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr4
Cytogenetic Bandq26
Human Strand
Human Integration Location Typeintergenic
Hg19 Start118044023
Hg19 End118044024
Hg38 Start117122867
Hg38 End117122868
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameNA
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1NA
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404163