Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024862

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024862
Fusion NameHBV-FGF14 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI005
Sample TypeTumor
Age47
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr13
Cytogenetic Bandq33.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start102814076
Hg19 End102814077
Hg38 Start102161726
Hg38 End102161727
Junction Sequence-
Target Gene
Target GeneFGF14
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12368
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404179