Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024867

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024867
Fusion NameHBV-EYS integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI007
Sample TypeAdjacent Liver
Age52
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr6
Cytogenetic Bandq12
Human Strand
Human Integration Location Typeintronic
Hg19 Start65660546
Hg19 End65660548
Hg38 Start64950653
Hg38 End64950655
Junction Sequence-
Target Gene
Target GeneEYS
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name+
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12314
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404184