Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024891

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024891
Fusion NameHBV-INTS4 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI009
Sample TypeAdjacent Liver
Age55
GenderFemale
Disease Information
Disease NameBile duct carcinoma
Disease AbbreviationBDC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr11
Cytogenetic Bandq14.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start77704108
Hg19 End77704110
Hg38 Start77993062
Hg38 End77993064
Junction Sequence-
Target Gene
Target GeneINTS4
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11796
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404208