Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024892

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024892
Fusion NameHBV-ENSG00000266923 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI009
Sample TypeAdjacent Liver
Age55
GenderFemale
Disease Information
Disease NameBile duct carcinoma
Disease AbbreviationBDC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr12
Cytogenetic Bandq22
Human Strand
Human Integration Location Typeintronic
Hg19 Start92840792
Hg19 End92840817
Hg38 Start92447016
Hg38 End92447041
Junction Sequence-
Target Gene
Target GeneENSG00000266923
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11456
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404209