Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024963

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024963
Fusion NameHBV-ADH1B integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI010
Sample TypeTumor
Age36
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr4
Cytogenetic Bandq23
Human Strand
Human Integration Location Typeexonic
Hg19 Start100239966
Hg19 End100239967
Hg38 Start99318809
Hg38 End99318810
Junction Sequence-
Target Gene
Target GeneADH1B
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11802
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404281