Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10024983

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10024983
Fusion NameHBV-CYP3A7-CYP3A51P integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI012
Sample TypeAdjacent Liver
Age47
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr7
Cytogenetic Bandq22.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start99323494
Hg19 End99323495
Hg38 Start99725871
Hg38 End99725872
Junction Sequence-
Target Gene
Target GeneCYP3A7-CYP3A51P, CYP3A7
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11747
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404303