Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025074

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025074
Fusion NameHBV-chr11:48833247 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI014
Sample TypeAdjacent Liver
Age56
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr11
Cytogenetic Bandp11.12
Human Strand
Human Integration Location Typeintergenic
Hg19 Start48854799
Hg19 End48854800
Hg38 Start48833247
Hg38 End48833248
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameNA
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1NA
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404394