Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025081

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025081
Fusion NameHBV-ENSG00000254777 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI014
Sample TypeAdjacent Liver and tumor
Age56
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr8
Cytogenetic Bandq12.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start61939096
Hg19 End61939097
Hg38 Start61026537
Hg38 End61026538
Junction Sequence-
Target Gene
Target GeneENSG00000254777
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameNA
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1NA
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404401