Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025135

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025135
Fusion NameHBV-ENSG00000286210 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI015
Sample TypeAdjacent Liver and tumor
Age60
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandq42.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start234719440
Hg19 End234719441
Hg38 Start234583694
Hg38 End234583695
Junction Sequence-
Target Gene
Target GeneENSG00000286210
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameNA
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1NA
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404455