Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025143

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025143
Fusion NameHBV-ENSG00000263489 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI015
Sample TypeTumor
Age60
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr17
Cytogenetic Bandq23.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start62051379
Hg19 End62051380
Hg38 Start63974019
Hg38 End63974020
Junction Sequence-
Target Gene
Target GeneENSG00000263489
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameNA
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1NA
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404464