Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025190

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025190
Fusion NameHBV-ENSG00000304359 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI016
Sample TypeTumor
Age62
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr8
Cytogenetic Bandq13.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start67526548
Hg19 End67526564
Hg38 Start66614313
Hg38 End66614329
Junction Sequence-
Target Gene
Target GeneENSG00000304359
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name+
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12573
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404512