Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025192

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025192
Fusion NameHBV-chr2:228331162 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI016
Sample TypeTumor
Age62
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandq36.3
Human Strand
Human Integration Location Typeintergenic
Hg19 Start229195878
Hg19 End229195902
Hg38 Start228331162
Hg38 End228331186
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint13073
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404514