Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025202

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025202
Fusion NameHBV-ENSG00000274265 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample NameI017
Sample TypeTumor
Age63
GenderFemale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandq21.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start144541272
Hg19 End144541289
Hg38 Start149155693
Hg38 End149155710
Junction Sequence-
Target Gene
Target GeneENSG00000274265
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11819
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404524