Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025206

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025206
Fusion NameHBV-DPP7 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample TypeHepG2.2.17 cell lines
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr9
Cytogenetic Bandq34.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start140008658
Hg19 End140008659
Hg38 Start137114206
Hg38 End137114207
Junction Sequence-
Target Gene
Target GeneDPP7
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404528