Details for VISDB ID: TVIS10025212
Genomic Region Visualization (IGV)
VISDB ID | TVIS10025212 |
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Fusion Name | HBV-MTCO3P12 integration |
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Validated | No |
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Curated Way | ViMIC |
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Method | Targeted Sequencing |
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Wet Assay | Yes |
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Sample ID | - |
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Sample Name | - |
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Sample Type | HepG2.2.23 cell lines |
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Age | - |
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Gender | - |
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Disease Name | - |
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Disease Abbreviation | - |
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Cancer | - |
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PubMed ID | 32100258 |
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Journal | Hepatology International |
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Published Year | 2020 |
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Human Genome Version Description | GRCh37/hg19 |
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Human Genome RefSeq Accession | GCF_000001405.13 |
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Human Chromosome | chr1 |
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Cytogenetic Band | p36.33 |
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Human Strand | |
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Human Integration Location Type | exonic |
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Hg19 Start | 569979 |
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Hg19 End | 569980 |
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Hg38 Start | 634599 |
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Hg38 End | 634600 |
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Junction Sequence | - |
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Target Gene | MTCO3P12, LINC00115 |
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Nearby Gene | - |
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Distance | - |
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Virus Name | Hepatitis B virus |
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Virus Subtype Name | - |
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Virus Genome Accession | - |
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TaxonomyID | 10407 |
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Virus Abbreviation | HBV |
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Virus Genome | - |
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Virus Genome Length | - |
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Virus Breakpoint1 | - |
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Virus Breakpoint2 | - |
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Virus Gene Name | - |
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Virus Region Type | - |
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Integrated Virus Sequence | - |
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ViMIC ID | 1404534 |
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