Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025213

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025213
Fusion NameHBV-ENSG00000227088 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample TypeHepG2.2.24 cell lines
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandp12
Human Strand
Human Integration Location Typeintronic
Hg19 Start77923780
Hg19 End77923781
Hg38 Start77696654
Hg38 End77696655
Junction Sequence-
Target Gene
Target GeneENSG00000227088
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404535