Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025242

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025242
Fusion NameHBV-chr11:102250718 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample TypeSaliva and paired cfDNA
Age-
Gender-
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr11
Cytogenetic Bandq22.1
Human Strand
Human Integration Location Typeintergenic
Hg19 Start102121449
Hg19 End102121585
Hg38 Start102250718
Hg38 End102250854
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404564