Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025288

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025288
Fusion NameHBV-DRAM2 integration
ValidatedNo
Curated WayViMIC
MethodTargeted Sequencing
Wet AssayYes
Sample ID-
Sample Namec005
Sample Type Tumor and paired cfDNA samples
Age-
GenderMale
Disease Information
Disease NameHepatocellular carcinoma
Disease AbbreviationHCC
CancerYes
Literature
PubMed ID32100258
JournalHepatology International
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandp13.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start111660957
Hg19 End111660982
Hg38 Start111118335
Hg38 End111118360
Junction Sequence-
Target Gene
Target GeneDRAM2
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name+
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1226
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404610