Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025384

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025384
Fusion NameHBV-DIP2B integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name1T
Sample TypeTumor
Age53
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr12
Cytogenetic Bandq13.12
Human Strand+
Human Integration Location Typeintronic
Hg19 Start51017347
Hg19 End51017347
Hg38 Start50623564
Hg38 End50623565
Junction Sequence-
Target Gene
Target GeneDIP2B
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint199
Virus Breakpoint2233
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404706