Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025385

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025385
Fusion NameHBV-chr13:59328464 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name1T
Sample TypeTumor
Age53
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr13
Cytogenetic Bandq21.2
Human Strand+
Human Integration Location Typeintergenic
Hg19 Start59902598
Hg19 End59902598
Hg38 Start59328464
Hg38 End59328465
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1501
Virus Breakpoint2655
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404707