Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025418

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025418
Fusion NameHBV-ENSG00000286995 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name1T
Sample TypeTumor
Age53
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr7
Cytogenetic Bandp12.2
Human Strand+
Human Integration Location Typeintronic
Hg19 Start49614518
Hg19 End49614518
Hg38 Start49574922
Hg38 End49574923
Junction Sequence-
Target Gene
Target GeneENSG00000286995
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1771
Virus Breakpoint2905
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404740