Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025459

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025459
Fusion NameHBV-ENSG00000304566 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name3T
Sample TypeTumor
Age49
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandq37.3
Human Strand-
Human Integration Location Typeintronic
Hg19 Start237807745
Hg19 End237807745
Hg38 Start236899102
Hg38 End236899103
Junction Sequence-
Target Gene
Target GeneENSG00000304566
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11810
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404782