Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025465

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025465
Fusion NameHBV-WNT11 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name6T
Sample TypeTumor
Age60
GenderFemale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr11
Cytogenetic Bandq13.5
Human Strand+
Human Integration Location Typeintronic
Hg19 Start75918786
Hg19 End75918786
Hg38 Start76207742
Hg38 End76207743
Junction Sequence-
Target Gene
Target GeneWNT11
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1463
Virus Breakpoint2597
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404788