Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025477

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025477
Fusion NameHBV-ADCY1 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name6T
Sample TypeTumor
Age60
GenderFemale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr7
Cytogenetic Bandp12.3
Human Strand+
Human Integration Location Typeintronic
Hg19 Start45749629
Hg19 End45749629
Hg38 Start45710030
Hg38 End45710031
Junction Sequence-
Target Gene
Target GeneADCY1
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1678
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404800