Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025478

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025478
Fusion NameHBV-chr8:82008108 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name6T
Sample TypeTumor
Age60
GenderFemale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr8
Cytogenetic Bandq21.13
Human Strand+
Human Integration Location Typeintergenic
Hg19 Start82920343
Hg19 End82920343
Hg38 Start82008108
Hg38 End82008109
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1953
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404801