Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025480

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025480
Fusion NameHBV-ENSG00000310201 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name7T
Sample TypeTumor
Age66
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr6
Cytogenetic Bandp24.1
Human Strand+
Human Integration Location Typeintronic
Hg19 Start11937608
Hg19 End11937608
Hg38 Start11937375
Hg38 End11937376
Junction Sequence-
Target Gene
Target GeneENSG00000310201
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11678
Virus Breakpoint21812
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404803