Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025504

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025504
Fusion NameHBV-ADH1B integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name9T
Sample TypeTumor
Age67
GenderFemale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr4
Cytogenetic Bandq23
Human Strand+
Human Integration Location Typeexonic
Hg19 Start158334508
Hg19 End158334508
Hg38 Start99317167
Hg38 End99317168
Junction Sequence-
Target Gene
Target GeneADH1B
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11830
Virus Breakpoint21964
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404828