Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025507

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025507
Fusion NameHBV-ENSG00000300381 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name9T
Sample TypeTumor
Age67
GenderFemale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr5
Cytogenetic Bandp15.33
Human Strand-
Human Integration Location Typeintronic
Hg19 Start1295396
Hg19 End1295396
Hg38 Start1295281
Hg38 End1295282
Junction Sequence-
Target Gene
Target GeneENSG00000300381
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11905
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404832