| Basic Information ▼ | |
| VISDB ID | TVIS10025532 |
|---|---|
| Fusion Name | HBV-LGI1 integration |
| Validated | No |
| Curated Way | ViMIC |
| Method | Hepatitis B virus capture sequencing |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | 1N |
| Sample Type | Paratumor tissues |
| Age | 53 |
| Gender | Male |
| Disease Information ▼ | |
| Disease Name | Intrahepatic cholangiocarcinoma |
| Disease Abbreviation | ICC |
| Cancer | Yes |
| Literature ▼ | |
| PubMed ID | 33037855 |
| Journal | Hepatology Research |
| Published Year | 2021 |
| Human Genome ▼ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr10 |
| Cytogenetic Band | q23.33 |
| Human Strand | + |
| Human Integration Location Type | exonic |
| Hg19 Start | 95530664 |
| Hg19 End | 95530664 |
| Hg38 Start | 93770907 |
| Hg38 End | 93770908 |
| Junction Sequence | - |
| Target Gene ▼ | |
| Target Gene | LGI1, ENSG00000280660 |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▼ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | - |
| Virus Genome Accession | - |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | - |
| Virus Genome Length | - |
| Virus Breakpoint1 | 393 |
| Virus Breakpoint2 | - |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | 1404857 |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D