Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025597

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025597
Fusion NameHBV-chr2:15888107 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name2N
Sample TypeParatumor tissues
Age59
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandp24.3
Human Strand-
Human Integration Location Typeintergenic
Hg19 Start16028231
Hg19 End16028231
Hg38 Start15888107
Hg38 End15888108
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12259
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404922