Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025607

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025607
Fusion NameHBV-ENSG00000286760 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name2N
Sample TypeParatumor tissues
Age59
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr6
Cytogenetic Bandq27
Human Strand+
Human Integration Location Typeintronic
Hg19 Start166759514
Hg19 End166759514
Hg38 Start166346026
Hg38 End166346027
Junction Sequence-
Target Gene
Target GeneENSG00000286760
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11778
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404932