Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025612

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025612
Fusion NameHBV-FGF13 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name2N
Sample TypeParatumor tissues
Age59
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human ChromosomechrX
Cytogenetic Bandq27.1
Human Strand+
Human Integration Location Typeintronic
Hg19 Start138020320
Hg19 End138020320
Hg38 Start138938158
Hg38 End138938159
Junction Sequence-
Target Gene
Target GeneFGF13
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11818
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404937