Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025636

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025636
Fusion NameHBV-chr22:36245688 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name4N
Sample TypeParatumor tissues
Age48
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr22
Cytogenetic Bandq12.3
Human Strand+
Human Integration Location Typeintergenic
Hg19 Start36641734
Hg19 End36641734
Hg38 Start36245688
Hg38 End36245689
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneAPOL2
Distance5735
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1155
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404961